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病毒基因组
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基因组编号 毒株名称 引用编号 病毒类型 物种名称 采样国家 采样时间 宿主 序列长度 发布时间 分离来源 物种ID 种名 属名 科名 数据源 采样单位 采样地址 提交者 提交者单位 覆盖度 有效碱基数量 有效碱基百分比
OEAV3245552 SARS-CoV-2/ferret/USA/G211/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433206 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29280 99.12
OEAV3245553 SARS-CoV-2/ferret/USA/G212/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433207 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245554 SARS-CoV-2/ferret/USA/G213/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433208 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245555 SARS-CoV-2/ferret/USA/G214/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433209 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245556 SARS-CoV-2/ferret/USA/G241/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433210 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245557 SARS-CoV-2/ferret/USA/G242/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433211 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245558 SARS-CoV-2/ferret/USA/G243/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433212 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245559 SARS-CoV-2/ferret/USA/G244/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433213 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29540 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 100.00
OEAV3245560 SARS-CoV-2/ferret/USA/G441/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433214 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29531 100.00
OEAV3245561 SARS-CoV-2/ferret/USA/G442/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes MZ433215 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29544 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29540 99.99
OEAV3245562 SARS-CoV-2/ferret/USA/G443/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433216 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29531 100.00
OEAV3245563 SARS-CoV-2/ferret/USA/G444/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433217 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29531 100.00
OEAV3245564 SARS-CoV-2/ferret/USA/G451/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433218 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29269 99.11
OEAV3245565 SARS-CoV-2/ferret/USA/G452/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433219 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29171 98.78
OEAV3245566 SARS-CoV-2/ferret/USA/G453/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433220 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29355 99.40
OEAV3245567 SARS-CoV-2/ferret/USA/G454/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433221 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29147 98.70
OEAV3245568 SARS-CoV-2/ferret/USA/G4C41/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433222 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29531 100.00
OEAV3245569 SARS-CoV-2/ferret/USA/G4C42/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433223 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29531 100.00
OEAV3245570 SARS-CoV-2/ferret/USA/G4C43/2021 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes MZ433224 RNA viruses Severe acute respiratory syndrome coronavirus 2 United States 2021-06-02 Mustela putorius furo 29531 2021-06-22 oronasopharynx 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae NCBI Virus/Genbank Greninger,A.L., Lin,M.J., Cox,R.M. and Plemper,R.K. Virology, University of Washington 29531 100.00
OEAV8857399 hCoV-19/ferret/USA/FL-21-028281-001/2021 EPI_ISL_5781754 RNA virus Severe acute respiratory syndrome coronavirus 2 United States 2021-09-18 Mustela furo 29789 2021-10-30 2697049 Severe acute respiratory syndrome-related coronavirus Betacoronavirus Coronaviridae GISAID Bronson Animal Disease Diagnostic Laboratory Kerrie M. Franzen, Mary L. Killian, Emily R. Love, Tod P. Stuber, Mia Torchetti, Suelee Robbe-Austerman Diagnostic Virology Laboratory, National Veterinary Services Laboratories, USDA1920 Dayton Avenue, Ames, IA 50010, USA 29789 100.00
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